CDS

Accession Number TCMCG057C14268
gbkey CDS
Protein Id XP_018474525.1
Location complement(join(27269817..27269883,27269967..27270035,27270114..27270230,27270318..27270430,27270521..27270595,27270727..27270864,27271137..27271258,27271344..27271403,27271640..27272164,27272288..27272612,27272721..27272864,27272968..27273042,27273121..27273191,27273289..27273391,27273463..27273689,27273782..27273899,27274199..27274329,27274629..27274656))
Gene LOC108845834
GeneID 108845834
Organism Raphanus sativus

Protein

Length 835aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018619023.1
Definition PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K18643        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACCACCAAGCGTGCTTACAAGCTCCAGGAGTTTGTGGCACATTCTGCTGCTGTGAACTGTCTTAAGATTGGGAGGAAGTCCTCTAGGAGTCTTGTAACTGGTGGGGAAGATCACAAGGTCAATCTTTGGGCTATTGGTAAGCCCAATGCCACTCTGAGCTTGCAAGGGCACTCGAGCGGGGTTGATTCAGTAACATTTGACGCTTCGGAAGGATTAGTAGCAGCAGGAGCTGCTAGTGGTACGATCAAACTTTGGGATCTCCAGGAGGCAAAGATTGTGAGGACTCTCACTGGTCACAGGTCGAATTGCATATCCTTGAATTTTCACCCGTTTGGTGAGTTTTTTGCTTCTGGTTCTCGAGACACGAATCTTAAGATATGGGATATAAGAAAGAAGGGTTGCATCCATACTTACAAAGGCCACACTCGAGGTGTCAATGTACTCAGATTCACCCCAGATGGTCGTTGGGTTGTATCTGGTGGAGAAGACAATGTTGTCAAGGTGTGGGACTTGACAGCTGGAAAACTGTTGCACGAGTTCAAGAGTCATGAAGGGCAAATCCAGAGTCTAGATTTTCATCCCCATGAGTTTCTTCTGGCAACAGGTTCAGCCGATAAGACTGTAAAATTCTGGGACCTTGAAACATTCGAGCTTATTGGTTCTGGTGGAACTGAGACTACTGGGGTTCGTTGCTTGACCTTTAATCCAGATGGAAAGAGTGTCCTTTGTGGATTGCATGAAAGCCTCAAGATTTTCTCATGGGAGCCAATAAGATGTCATGATGGAGTGGATGTTGGATGGTCAAACTTATCAGATATGAACGTTCACGAGGGAAAGCTTCTTGGTTGCTCATATAATCAAAACTGTGTAGGCGTGTGGGTTGTAGACCTCTCGACTGAGCCTATGAGTAGAGGCACCACTCAGTCAAACTTTCATCCAGAGAGAGGCAGAGATCAACCAGTTCTGAATGATAACAGCTCAAAGGTTATTCTCAGAAATGGTTCCCAGAAAGTGAATCCTTCATTGAAAGAAACAAAGTCTCATGGAAGATCATCAGTTCCTCAAAACCCGGATCCTTCACCAAAGGAAACAAAGTCTACTGGAAGGTCATCAGTATCTCAAAGTTCAGATCCTTTGATAAAGGAACAACCAAAGCCTCTTGGAAGGCTGTCAGTTAATCATAGTTCAGACGCAGTTAAAGAGTCATTAACCTCGTCATCCACTGGAAGTACATCAGGCTCTCCTCATAGGGTCACATTAACAAATTCTCCAAAAGTTGCTTCTGGTGTTTCTACGGTTGTTGTCTCTACTGCTGCAGCCTCAAAGAGGAATAACTTAAAGGCAAATCTTCGAGTAGTCAATAAAGGGGATTATTTCCCAGTAATTGTCCCCAGAACGGACCACCCAGTGATTGAGCAGGCAGTTGAATCCAGAGCAGAACTTGACATCATTGGAAGAACTATGCCATATTCGTTGCAGTCCAAGGCGGCTGATTCTCGAAGGCTGTCTAGCATCAGAAACGAGCTGGTGGATCCACCAACTGATTCACTTCTTGAAAGGTCTCAGTCTCAGCAGCCTATAGAATCAAGCAGTTTACAGGACGGAAATACGTTTACTAGTGAAGAATGTGGCGCATGGGATACAGCTGAGAGAAAAAATAAAGACAACAGATACAACAGGGGATTTGGAAGGTTTAATTCACAGTCTCTACTAAGATCTCCTCCAAGAAATCACGACGAAAATTCTGACATGAATGGCTTTAACGCAAATAGAGATCAAAGTCCTACTGAAAGTCGAAGAGGAGGAAGACTGCATTCCCTATCTCTATATAGGGAAAGAAGAGGAAGAATTTTCAACTTGGAGAGTCATGTTTCGAGTTCTTCTGGTGGAAATATGACTACACCAAACACTCGCCCTTCCAATATGCTCATCAATCAGAGAGGAAACCATGTACGACTTGATGAAGGAATCACTTCTGATAGTGAAGAAGATAAAGCTGCAGAGGTAATGGGGCAGCACGATCAATTTGTCAGCTCTATGCAGTCTCGTTTGGCTAAGTTACAGGTTGTCCGAAGATATTGGGAAAGAAACGATGTTAAAAACTCAATAAGTTCAATAGAGAAGATGGCTGATAATGCTGTCGTTGCGGATGTATTGGTTATAATCACTGAGAGAACTGAGATATTGACACTGGATACATGTACCTCTCTTCTTCCCCTTTTGACAGCTCTTTTGGGGAGTAACATGGATAGACATTTGAGTGTCTGCCTAGACTTGCTGCTTAAACTGGTAAGGATCTATGGGTCACAAATTTACTCGTCGCTGTCAGCTCCATCATCTGTTGGTGTAGATATTGAGGCTGAACAAAGGATGGAGCGGTACAGTCGTTGCTTTGTTGAACTCGAGAAAATCAAGGCTTGTCTTCCCTCTTTAGAAAGAAGAGGAGGATTAGTGGCGAAGACTATCCATGAACTCAACTTAATATTCCAAGAAGTTTCGTCATGA
Protein:  
MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRSLVTGGEDHKVNLWAIGKPNATLSLQGHSSGVDSVTFDASEGLVAAGAASGTIKLWDLQEAKIVRTLTGHRSNCISLNFHPFGEFFASGSRDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNVVKVWDLTAGKLLHEFKSHEGQIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLHESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSTEPMSRGTTQSNFHPERGRDQPVLNDNSSKVILRNGSQKVNPSLKETKSHGRSSVPQNPDPSPKETKSTGRSSVSQSSDPLIKEQPKPLGRLSVNHSSDAVKESLTSSSTGSTSGSPHRVTLTNSPKVASGVSTVVVSTAAASKRNNLKANLRVVNKGDYFPVIVPRTDHPVIEQAVESRAELDIIGRTMPYSLQSKAADSRRLSSIRNELVDPPTDSLLERSQSQQPIESSSLQDGNTFTSEECGAWDTAERKNKDNRYNRGFGRFNSQSLLRSPPRNHDENSDMNGFNANRDQSPTESRRGGRLHSLSLYRERRGRIFNLESHVSSSSGGNMTTPNTRPSNMLINQRGNHVRLDEGITSDSEEDKAAEVMGQHDQFVSSMQSRLAKLQVVRRYWERNDVKNSISSIEKMADNAVVADVLVIITERTEILTLDTCTSLLPLLTALLGSNMDRHLSVCLDLLLKLVRIYGSQIYSSLSAPSSVGVDIEAEQRMERYSRCFVELEKIKACLPSLERRGGLVAKTIHELNLIFQEVSS